Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800128.1_cds_XP_016468131.1_6035
CDS Infomation

[gene=LOC107790682] [db_xref=GeneID:107790682] [protein=anaphase-promoting complex subunit 6-like isoform X2] [protein_id=XP_016468131.1] [location=join(51186..51431,53679..53813,53918..53991,55397..55436,55740..55785,56624..56703,56972..57153,57317..57442,59054..59128,60837..60962,62439..62508,62703..62773,63081..63194,63791..63890,63974..64009,64197..64319)] [gbkey=CDS]
Sequence

ATGAGGGAAGAGGAAATAGAGAGGCTAAGAGGTGTAGTGAGGGATTGTGTGAGCAAGCAT
TTGTATTCATCAGCCATCTTCTTTGCTGACAAAGTGGCCGCAATTACTTCAGACCCAGCT
GATATATATATGCAAGCACAAGCGTTGTATCTAGGTCGACACTATCGCCGTGCTTTCCAC
CTTCTCAATGCTTCCCAAATCGTCCTCCGTGACCTCCGCTTCCGTTACCTCGCCGCTAAG
TGCCTCGAAGAGCTGAAGGAGTGGGATCAATGTCTTCTAATGCTGGGTGATGCTAAAGTG
GATGAACATGGAAATATTACTGACACAAGGGAGTGCAATAGTATGTACTTAGACAGGGAT
GGTGAAGATCGCGAAATAAATATTTTATCAGCAATATGCTTTTTGAGGGGCAAGGCATAT
GAAGCTTTGGAGAATCGCGCACAGGCTCGGCTATGGTATAAAGCTGCTATCAAGGCTGAT
CCTTTGTGTTATGAGGCATTGGAATGTCTGATAGAGAATCACATGCTCGCTTGTGATGAA
GAGAAAACCCTGCTCTCATGTTTGCAATTTGGTCCCGAAGATGGGTGGCTCTCTTCATTC
TATTCTTGTTTGATAAAGAAGTATGATAAAGAAAATGTGGTGGAAGCCAAATTTAGAGAG
CTGGAACAGGGTGGACCTAATACAAAGACGTCCGAAAAATCTGTTTTATGTACGCTTAAA
GCCAACACTGATCTTTTGGCCTGCAAAGCCGAGTACTATCATCAATGTGGTGAATATCAG
AAATGCTTTGAACTAACTTCTGAATTGCTTGAAAAGGATCCATTCCATCTCAAGTGTACC
CTGGTGCATTTGGCAGCAGCAATGGAGCTAGGACATTCCAATGAGCTGTATCTTATGGCT
TGCAATTTAGTGAAGGATTATCCTCAAAAGGCTCTCTCATGGTTTGCTGTCGGTTGCTAC
TACTATTGTATCAAGAAATATGACCAAGCACGACGCTATTTTAGTAAGTCAACAAGCTTA
GATGGAACATTTGCTTCAGCTTGGATAGGCTATGGAAATGCTTATGCAGCTCAAGAAGAA
GGAGACCAAGCAATGTCAGCTTACCGTACTGCTGCTAGATTATTTCCTGGGTACCATTTG
CCTACTTTGTACATTGGAATGGAATATATGCGAACTCACAGCTTTAAACTGGCTGAGCAG
GCCAAGTCAATATGCCCCTCAGATCCCCTTGTATATAATGAACTTGGAGTTGTTTCTTAT
CACATGAAGGAGTATAAGAAAGCAGTGCGGTGGTTTGAGAAAACATTGACTCACATTCCA
TCTTCCTTAAGTGAGATATGGGAATCAACTGTAATCAATCTTGCTCATTCCCTCAGAAAA
TTAAAGAGGTACAACGAAGCAATTACATATTATGAGAGAGCCCTTGCATTGTCTACGAGA
AGTTTAAGTACTTATGCAGGTCTTGCATACACTTATCACCTTCAGAACAATTACACTGCA
GCTATTACATACTACCACAAGGCTTTGTGGCTCAAACCAGATGACCAATTCTGCACAGAA
ATGTTGACTTCAGCTCTGGTTGATGAAAGCCGCCAAGGGATTGACCCAATGGTTGAATCT
CGTTGTGGTGGTCTATTTATCTAA

Peptide Sequence

PEP ID

XP_016468131.1
PEP Infomation

PREDICTED: anaphase-promoting complex subunit 6-like isoform X2 [Nicotiana tabacum]
Sequence

MREEEIERLRGVVRDCVSKHLYSSAIFFADKVAAITSDPADIYMQAQALYLGRHYRRAFH
LLNASQIVLRDLRFRYLAAKCLEELKEWDQCLLMLGDAKVDEHGNITDTRECNSMYLDRD
GEDREINILSAICFLRGKAYEALENRAQARLWYKAAIKADPLCYEALECLIENHMLACDE
EKTLLSCLQFGPEDGWLSSFYSCLIKKYDKENVVEAKFRELEQGGPNTKTSEKSVLCTLK
ANTDLLACKAEYYHQCGEYQKCFELTSELLEKDPFHLKCTLVHLAAAMELGHSNELYLMA
CNLVKDYPQKALSWFAVGCYYYCIKKYDQARRYFSKSTSLDGTFASAWIGYGNAYAAQEE
GDQAMSAYRTAARLFPGYHLPTLYIGMEYMRTHSFKLAEQAKSICPSDPLVYNELGVVSY
HMKEYKKAVRWFEKTLTHIPSSLSEIWESTVINLAHSLRKLKRYNEAITYYERALALSTR
SLSTYAGLAYTYHLQNNYTAAITYYHKALWLKPDDQFCTEMLTSALVDESRQGIDPMVES
RCGGLFI

Transcript Sequence

Gene sequence data has not been registered.